= 2010-10-19 =

== Presentation Friday ==

* Talk went well
* Was expecting more feedback
* Kostavas asked on MOLGENIS

== Plan BBMRI ==

Theme 1: fill the database

First goal: get LifeLines features included in BBMRI biobank.

* get BBMRI catalog running
* import the Excel


{{{
In the generation of the bbmri.generate : 
The bbmri_ui.xml contained  a form 

<form name="Biobanks" sortby="Name" view="list" entity="Biobank" hide_fields="Investigation,__Type,observationTargetType,individuals">

which produced error at the hide fields. I removed them , and the database was created correctly . I'm guessing something was missing and it wasn't  working. Any ideas?

}}}

* biobank is a kind of panel
* Lifelines is one of the biobanks
* Get from Joris is a Excel export 

Next goal: import more biobank information which we get from our BBMRI-EU colleagues

Theme 2: start with 'semantic molgenis'

First goal: link MOLGENIS to external ontology

* first enhance N3 file with external mapping
* then test if we use that ontology in SPARQL query
* if works: then update the MOLGENIS model + generator

Next step: investigate ontologies that should be linked
* how about biobankers list of Marco Roos?
* disease ontology?
* material ontology?

Actions
* Have Kostavas visit?
* Connect to Pedro to investigate his 'semantic molgenis' work?
* Connect to BBMRI-EU to request more data?