= MOLGENIS development manual =

 * [wiki:MolgenisGuide Table of Contents]
  * '''Introduction'''
   * [wiki:MolgenisIntro Introduction]
   * [wiki:MolgenisToc Detailed table of contents]
  * '''MOLGENIS application overview'''
   * [wiki:MolgenisUserInterface Browsing and editing]
   * [wiki:MolgenisBatchLoading CSV file loading]
   * [wiki:MolgenisRinterface Connecting to R]
   * [wiki:MolgenisSoapInterface Connecting to SOAP web services]
  * '''Toolkit Installation'''
   * [wiki:MolgenisOnWindows Preperation on Windows]
   * [wiki:MolgenisOnUbuntu Preperation on Ubuntu/Linux]
   * [wiki:MolgenisOnEclipse Installation of Eclipse]
   * [wiki:MolgenisDownload Download MOLGENIS]
  * '''Generating your own applications'''
   * [wiki:MolgenisWorkspaceBasics MOLGENIS workspace basics]
   * [wiki:MolgenisGeneratorBasics Running the generator]
   * [wiki:MolgenisAddressBookExample Modeling a new MOLGENIS]
   * [wiki:MolgenisFromExisting Modeling an existing database]
   * [wiki:MolgenisProperties molgenis.properties file]
  * '''Adding plug-ins'''
   * [wiki:MolgenisPlugin Screen plugin]
   * [wiki:MolgenisDatabase Database plugin]
   * [wiki:MolgenisEmail Email plugin]
   * [wiki:MolgenisCustomCommand Command plugin]
   * [http://gbic.target.rug.nl:8080/hudson/job/molgenis_3.3/javadoc/ JavaDoc]
  * '''MOLGENIS Language Reference'''
   * [wiki:MolgenisElement <molgenis> element]
   * [wiki:ModuleElement <module> element]
   * [wiki:EntityElement <entity> element]
   * [wiki:FieldElement <field> element]
   * [wiki:UniqueElement <unique> element]
   * [wiki:FormElement <form> element]
   * [wiki:MenuElement <menu> element]
   * [wiki:PluginElement <plugin> element]
  * '''Frequently asked questions'''
   * [wiki:MolgenisRenameProject How to change molgenis url from /molgenis_distro to xyz]
   * [wiki:MolgenisServletDecorator How to change the MolgenisServlet, e.g. to add more services]