* Create account @ https://github.com/
 * Fork https://github.com/molgenis/molgenis &  https://github.com/molgenis/molgenis_apps
 * download github command line version

== configure ==
!https://help.github.com/articles/set-up-git

 * @commandline try retrieving projects by CLONING (Fork a repository online (molgenis/molgenis)) :
   * create folders, cd there and try (Clone it to your HDD) . After forking a molgenis
   * repos: git clone git@github.com:<yourname>/molgenis.git
   * git clone [https://github.com/molgenis/molgenis.git https://github.com/<username>/molgenis.git]
   * git clone [https://github.com/molgenis/molgenis_apps.git https://github.com/<username>/molgenis_apps.git]
   * git remote add molgenis https://github.com/molgenis/molgenis.git
   * [https://github.com/molgenis/molgenis.git git remote add molgenis https://github.com/molgenis_apps/molgenis_apps.git]
   * [https://github.com/molgenis/molgenis.git git remote]
   * [https://github.com/molgenis/molgenis.git git remote -v]
   * [https://github.com/molgenis/molgenis.git Pull from the remote]
     * [https://github.com/molgenis/molgenis.git git pull molgenis master]

== update project  = pull project ==
 * Go into the directory molgenis  git pull --all

== "commit" = push  a change : ==
 * Edit a file vi DEVELOPERS
 * git add filename
 * git status
 * git diff
 * git commit -a (Commit the code locally, ) or git commit –m ‘Changed a file’
 * git status
 * git push origin ( If your done update your ‘fork’ git push, Push the local commits to your repository)
 * git push origin master (Add an upstream remote)

On the website:  Create a PULL request to: molgenis/molgenis/master This will pack ALL current changes in master to be submitted to molgenis WHICH IS BAD!  GOOGLE: “Creating good pull request”  !   https://help.github.com/articles/using-pull-requests

== Work within a branch. ==
Create a pull request for 1 branch !

 * git branch new_feat
 * git branch bug_fixes
 * git checkout new_feat

Hack AWAY, all commits are to new_feat, when you push the first time:

 * git push origin new_feat

== Every morning: ==
 * PULL from the molgenis organisation :  *git remote add molgenis git://github.com/molgenis/molgenis.git
 * GIT STATUS -> if changes:
 * git commit (or git stash)
 * Get changes git pull molgenis master Solve any conflict git commit –m “Morning molgenis merge” git push

== WORD of WARNING ==
 * NEVER force push origin master
 * If you cannot push, you need to pull ☺
 * Force push destroys your fork !!!!
 * So just never
 * If you did ☹ you should: Directly delete your repository on the website fork, clone,
 * remote add -> molgenis/molgenis again
 * If you have stuff you want to keep:
 * SAVE the files outside of the repos, and commit them back in after you setup a new remote fork and local repository

== Git @ eclipse ==
http://www.vogella.com/articles/EGit/article.html

http://wiki.eclipse.org/Git

== Troubleshooting ==
Problem with push in eclipse :

!http://stackoverflow.com/questions/9003840/how-do-i-push-to-git-repo-given-the-following-error-an-internal-exception-occur

|| '''[[BR]]2'''[ down vote] || I faced the same problem and I found out solution which is extremely foolish. [[BR]]I took following steps: [[BR]][[BR]] * I logged into ''git repository'' of my project from ''browser'' and didn't sign out.[[BR]] * I copied the '''http url''' to ''push'' or ''pull'' from project repository from ''github''.[[BR]] * I pasted the ''url'' in my ''eclipse plugin'' while pushing code (didn't use the already stored one even though both of them were same)[[BR]][[BR]]I don't know what and why but above steps have worked for me whenever I have faced above problem. I don't know why does eclipse throw such exceptions and why does it gets solved this way.[[BR]][[BR]]You can also try pushing using other ways outside of eclipse. for eg. !`TortoiseGit` or !`SmartGit` etc. ||

== PULL FROM USER ==
 * git remote add user https://github.com/user/molgenis.git
 * git remote
 * git pull user master

PULL FROM molgenis/apps

 * git remote add molgenis_apps https://github.com/molgenis/molgenis_apps.git
 * git pull molgenis_apps master