1 | name = 'FastQC' |
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2 | namelower = name.lower() |
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3 | version = '0.11.3' |
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4 | |
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5 | homepage = 'http://www.bioinformatics.babraham.ac.uk/projects/fastqc/' |
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6 | description = """FastQC - A Quality Control application for FastQ files.""" |
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7 | |
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8 | toolchain = {'name': 'dummy', 'version': 'dummy'} |
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9 | easyblock = 'PackedBinary' |
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10 | |
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11 | java = 'Java' |
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12 | javaver = '1.7.0_76' |
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13 | versionsuffix = '-%s-%s' % (java, javaver) |
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14 | |
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15 | dependencies = [(java, javaver)] |
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16 | |
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17 | # |
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18 | # Example URL: |
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19 | # http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.3.zip |
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20 | # |
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21 | source_urls = [('http://www.bioinformatics.babraham.ac.uk/projects/%s' % namelower)] |
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22 | sources = [('%s_v%s.zip' % (namelower, version))] |
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23 | |
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24 | sanity_check_paths = { |
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25 | 'files': ["fastqc" ], |
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26 | 'dirs': [] |
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27 | } |
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28 | |
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29 | # |
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30 | # Make FastQC binary (perl start script) executable. |
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31 | # (Mode may by masked by umask.) |
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32 | # |
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33 | postinstallcmds = ['chmod 775 %(installdir)s/%(namelower)s'] |
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34 | |
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35 | sanity_check_commands = [('%(namelower)s', '--version')] |
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36 | |
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37 | moduleclass = 'bio' |
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