Changes between Version 33 and Version 34 of BBMRI
- Timestamp:
- 2010-11-19T09:57:26+01:00 (14 years ago)
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BBMRI
v33 v34 46 46 * Connect Concept wiki with Ontology Terms : 47 47 * links seems to be http://conceptwiki.org/index.php/Term:Allergy ..so automatic extraction 48 * The user terms are linked with Concept wiki 48 * The user terms are linked with Concept wiki - despoina (DONE) 49 49 * Some of them does dot exist ..contact christina . e.g. alzheimer ..that is too general , alzheimer_dis connect to !http://conceptwiki.org/index.php/Term:ALZHEIMERS%20DIS 50 50 * Insert some link to concept wiki to see how to connect (DONE) 51 * Create new molgenis plugin for upload concept wiki terms (can this done by batch Upload plugin ? ) - this may not not be needed - explore (despoina & christina) 51 * Create new molgenis plugin for upload concept wiki terms (can this done by batch Upload plugin ? ) - this may not not be needed - explore (despoina & christina) 52 52 * Check whether reads the name of the column in the csv and imports in the corresponding table. 53 53 * Connect each term that is fould to the corresponding record in the local DB . (almost DONE) 54 54 * make sure that the search results make sense, i.e., list of features | biobank name - despoina (almost DONE) 55 * Add user authentication - (despoina) 55 56 * transfer local version to gbic server http://gbic.target.rug.nl:8080/biobanks/molgenis.do 56 57 * upload or correct database contents 57 58 * create indexes in folder : /home/despoina/index 58 59 * change configuration variables 59 * upload index in case connection with DB does not work 60 * test search in indexes 60 * upload index in case connection with DB does not work - despoina (DONE) 61 * test search in indexes - despoina (DONE) 61 62 * make from each element in this list a link to the right biobank (if you get stuck wait) - despoina 62 63 63 64 Subtasks explained here: [[BBMRI_task2]] 64 65 65 === Task 3: Add and improve sparql interface === 66 66 ''' Primary goal: make catalogue queriable by sparql '''