Changes between Version 110 and Version 111 of ComputeStart


Ignore:
Timestamp:
2013-10-21T14:21:11+02:00 (11 years ago)
Author:
Pieter Neerincx
Comment:

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  • ComputeStart

    v110 v111  
    11[[BlogList(recent=7, max_size=250, format=float, heading=News, category=MCF)]]
    22
    3 = Welcome to MOLGENIS Compute =
    4 MOLGENIS Compute is a framework for bioinformatics which enables large scale data and computational workflow management in a distributed execution environment.
     3= About MOLGENIS/compute =
     4MOLGENIS/compute is a framework for bioinformatics which enables large scale data and computational workflow management in a distributed execution environment.
    55
    6 Compute 5 (for research and development):
     6= Getting Started =
    77
    8 * [http://www.molgenis.org/raw-attachment/wiki/ComputeStart/molgenis-compute-core-0.0.1-SNAPSHOT-distribution.zip Download latest stable Molgenis Compute 5 distribution]
    9 * [http://www.molgenis.org/jenkins/job/new-molgenis/ws/molgenis-compute-core/target/molgenis-compute-core-0.0.1-SNAPSHOT-distribution/*zip*/molgenis-compute-core-0.0.1-SNAPSHOT-distribution.zip Download latest beta build of Molgenis Compute from Jenkins]
    10 * [https://github.com/molgenis/molgenis-compute Molgenis Compute source code @ GitHub repository]
    11 * [https://rawgithub.com/molgenis/molgenis-compute/master/molgenis-compute-core/README.html Molgenis Compute user guide @ GitHub repository]
     8== Compute 5 (for research and development): ==
    129
    13 Recent presentations:
     10* [http://www.molgenis.org/raw-attachment/wiki/ComputeStart/molgenis-compute-core-0.0.1-SNAPSHOT-distribution.zip Download latest stable MOLGENIS/compute 5 distribution]
     11* [http://www.molgenis.org/jenkins/job/new-molgenis/ws/molgenis-compute-core/target/molgenis-compute-core-0.0.1-SNAPSHOT-distribution/*zip*/molgenis-compute-core-0.0.1-SNAPSHOT-distribution.zip Download latest beta build of MOLGENIS/compute from Jenkins]
     12* [https://github.com/molgenis/molgenis-compute MOLGENIS/compute source code @ GitHub repository]
     13* [https://rawgithub.com/molgenis/molgenis-compute/master/molgenis-compute-core/README.html MOLGENIS/compute user guide @ GitHub repository]
     14
     15== Presentations: ==
     16
    1417 * [http://www.molgenis.org/raw-attachment/wiki/ComputeStart/IWSG-2013-presentation.pdf Presentation at IWSG-2013 (June 2013)]
    1518 * [http://www.molgenis.org/raw-attachment/wiki/ComputeStart/DijkstraTargetConference2013.pdf Presentation at the Target conference (April 2013)]
    … …  
    1720 * [http://www.molgenis.org/raw-attachment/wiki/ComputeStart/October_2012.pdf Presentation at NBIC BioAssist (October 2012)]
    1821
    19 Publications:
     22== Publications: ==
     23
    2024 * [http://www.molgenis.org/raw-attachment/wiki/ComputeStart/IWSG-2013.pdf Scaling bio-analyses from computational clusters to grids (2013)]
    2125 * [http://www.molgenis.org/raw-attachment/blog/2012/11/22/bioinformatics2012.pdf Introducing Data Provenance and Error Handling for NGS Workflows within the MOLGENIS Computational Framework (2012)]
    2226 * [http://www.molgenis.org/raw-attachment/blog/mcf-cyprus/pdp-2011.pdf Towards a MOLGENIS based computational framework (2011)]
    2327
    24 Old Compute 4 (recommended for production work):
     28== Old compute 4 (recommended for production work): ==
    2529
    26  * [https://github.com/molgenis/molgenis_apps-legacy/blob/testing/doc/compute/01_compute_introduction.md Molgenis Compute 4 User Guide]
     30 * [https://github.com/molgenis/molgenis_apps-legacy/blob/testing/doc/compute/01_compute_introduction.md MOLGENIS/compute v4 User Guide]
    2731 * [https://github.com/molgenis/molgenis_apps-legacy/blob/testing/doc/compute/02_compute_imputation.md Imputation pipeline]
    2832 * [https://github.com/molgenis/molgenis_apps-legacy/blob/testing/doc/compute/03_compute_ngs.md Next-generation sequencing pipeline]
    2933 * [https://github.com/molgenis/molgenis_apps-legacy/blob/testing/doc/compute/04_installation_of_tools.md Installation of tools]
    30  * [http://molgenis26.target.rug.nl/downloads/molgenis_compute-4-latest.zip Compiled MOLGENIS Compute v4 distribution of 2013-03-08]
     34 * [http://molgenis26.target.rug.nl/downloads/molgenis_compute-4-latest.zip Compiled MOLGENIS/compute v4 distribution of 2013-03-08]
    3135
    32 == Where Molgenis/compute is used? ==
     36= Where is MOLGENIS/compute used? =
    3337
    3438[[Image(logos1.jpg)]]
    3539 
    36 == Who is behind Molgenis/compute ? ==
     40= Who develops MOLGENIS/compute? =
    3741
    38 Molgenis/compute is created by the [http://www.molgenis.org/wiki/GccStart Genomics Coordination Center team] in the University Medical Centre Groningen, the Netherlands.
     42MOLGENIS/compute is created by the [http://www.molgenis.org/wiki/GccStart Genomics Coordination Center team] in the University Medical Centre Groningen, the Netherlands.