Changes between Version 1 and Version 2 of Courses/ComputationalMolecularBiologyResearch2015/P8


Ignore:
Timestamp:
2015-01-31T20:44:37+01:00 (10 years ago)
Author:
Pieter Neerincx
Comment:

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  • Courses/ComputationalMolecularBiologyResearch2015/P8

    v1 v2  
    1 = Changes in the gut microbiome: Analyzing Whole Genome Shotgun data =
     1= Interaction of microbe and host genomes in IBD =
    22
    33== Supervisors ==
    … …  
    1313After identifying bacteria using Next Generation Sequencing of one gene called 16S rRNA, our group started using a more complex technique called Whole Genome Shotgun Sequencing (WGS). With WGS all genes in a sample are sequenced. Using bioinformatics tools, the sequences can be used to identify which bacterial species are present.
    1414
    15 == Project 8 - De novo assembly of microbiome data to detect host (human) DNA ==
     15== Project 8 - De novo assembly of bacterial genomes or interrogation of metagenomic 16s RNA data ==
    1616
    1717This 6-week assignment consists of: