debug on Lucene indexing on molgenis dbs

Using MultiSearcher in Lucene "all database tables" search :

• ​http://stackoverflow.com/questions/958043/pros-and-cons-of-using-lucenes-multisearcher-class
• Search on multiple indexes:
• ​https://issues.apache.org/jira/browse/LUCENE-556
• ​http://lucene.apache.org/java/2_4_0/api/org/apache/lucene/search/Searchable.html *

On DBIndexPlugin.java: SearchLuceneIndex?:

• if you copy index created on the single gene table - search work: problem @ creation of index.
• "All tables index" insert in db like this:
  • field : ring finger and WD repeat domain 2 pseudogene
  • field : 27036
  • field : TBCAP1
  • field: Xp21
• "Single table index " inserts like

• * stored,omitNorms<geneName:PPRC1> Gene(id='9580' geneName='PPRC1' chromosomeLocation='10q24.32' geneDescription='peroxisome proliferator-activated receptor gamma, coactivator-related 1');
• Fields are inserted now in the form of :
  • nullclass hvp_pilot2.Gene(id='45020')class hvp_pilot2.Gene(geneName='MIR1287')class hvp_pilot2.Gene(chromosomeLocation='10q24.2')class hvp_pilot2.Gene(geneDescription='microRNA 1287')
  • * So probably the problem may be in the retrieval of these fields (search index - specify the field names for the db class. (NExt todo )

(From ICT plan system biology --> OpenBIS : )

​http://www.cisd.ethz.ch/software/openBIS

​https://wiki-bsse.ethz.ch/download/attachments/43126125/openBIS_intro_AB_20100421.mp4