Changes between Version 10 and Version 11 of DespoinaLog/2010/12/09


Ignore:
Timestamp:
2010-12-09T14:01:17+01:00 (14 years ago)
Author:
antonak
Comment:

--

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  • DespoinaLog/2010/12/09

    v10 v11  
    77 * create new table biobank from pheno project as follows:
    88
    9   mysql> create  table biobank_new select Acronym, Category, Type, Size, !LastUpdate      , Description, id from biobank ;
     9  mysql> create  table biobank_new select Acronym, Category, Type, Size, !LastUpdate       , Description, id from biobank ;
    1010
    1111  (only fields that exist in biobank in gcc project)
     
    2828'''!ObservationElement''' ON (Biobank.id = !ObservationElement.id) LEFT JOIN
    2929
    30   '''   Investigation'''    AS xref_Investigation  ON xref_Investigation.id = !ObservationElement   .Investigation LEFT JOIN
     30  '''    Investigation'''     AS xref_Investigation  ON xref_Investigation.id = !ObservationElement    .Investigation LEFT JOIN
    3131
    3232'''!OntologyTerm''' AS xref_ontologyReference  ON xref_ontologyReference.id = !ObservationElement.ontologyReference LEFT JOIN
     
    4444Name    Type    Acronym category_term   topics_term     institutes_name contacts_lastName       size    materials_term  GWA data n =    GWA platform    GWA comments    description
    4545}}}
     46try to import as it is : 
     47
     48Need to removes characters like , ( ) ; + . Comma and parenthesis  was replaced by or ; by some spaces and plus by plus. OntologyTerm term was replaced by name .
     49
     50After uploading : error  : '''Column '!PanelType' cannot be null'''
     51
     52two new columns added :
     53
     54|| !__Type || !PanelType ||
     55|| !OntologyTerm || PanelType ||
    4656
    4757
    48 srth
     58
     59still error with '''Column '!PanelType' cannot be null'''
     60
     61