Changes between Version 27 and Version 28 of HPC_deploy
- Timestamp:
- 2015-11-19T00:40:03+01:00 (9 years ago)
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HPC_deploy
v27 v28 12 12 13 13 If you want to join the ''depad'' group, please [wiki:Contact contact the helpdesk]. 14 The depad group uses [https://hpcugent.github.io/easybuild/ EasyBuild], which uses !EasyConfigs as recipes to enforce consistent, reproducible installations.14 The depad group uses [https://hpcugent.github.io/easybuild/ EasyBuild], which in turn uses !EasyConfigs as recipes to enforce consistent, reproducible installations. 15 15 In a nutshell an !EasyConfig deployment recipe can handle the following steps: 16 16 1. (Bootstrap an installation and satisfy dependencies) … … 25 25 26 26 The locations where we store source code, deployed apps, their accompanying module files, etc. are documented in the [wiki:HPC_storage#Software Storage SOP]. 27 !EasyBuild comes with !EasyConfigs for many o ur apps of interest ''out of the box''; These files are stored27 !EasyBuild comes with !EasyConfigs for many of our apps of interest ''out of the box''; These files are stored 28 28 * On our machines in a sub sub sub directory of where !EasyBuild was installed - Latest stable release we deployed.[[BR]] 29 29 The easiest way to find this directory is to load !EasyBuild and search for an app like this: … … 54 54 55 55 If there is no existing !EasyConfig, we have to create one ourselves. 56 57 First an example of an custom !EasyBuild file created for deploying our NGS_DNA pipeline. Below the code there will be the explanation of all the steps in the script.56 First an example of a custom !EasyBuild file created for deploying our NGS_DNA pipeline. 57 Below the code there will be the explanation of all the steps in the recipe. 58 58 {{{ 59 59 name = 'NGS_DNA'