Changes between Version 6 and Version 7 of Modules/Compute/UsingRscripts

Timestamp:

2011-02-24T18:30:05+01:00 (14 years ago)

Author:

Morris Swertz

Comment:

--

Modules/Compute/UsingRscripts

@@ -79 +79 @@
         selectedNames <- sliceList(i,number_of_jobs)
 
-        //define what other job MOLGENIS should call 
-        submitJob(command="onetraitqtlmapping", genotypes_name=genotypes_name, phenotypes_name=phenotypes_name, traitnames=selectedNames);
+        //define what other 'compute protocol' MOLGENIS should call (obviously the one we defined above)
+        submitJob(command="OneTraitQtlMapping", genotypes_name=genotypes_name, phenotypes_name=phenotypes_name, traitnames=selectedNames);
 
         //Note: all parameters you pass to submitJob will be automatically passed to the other protocol
@@ -87 +87 @@
 }}}
 
-Note how we replaced "trait_names" with "number_of_jobs" because we just want to run all phenotypes :-)
+Notice how we replaced "trait_names" with "number_of_jobs" because we just want to run all phenotypes :-)
+
+For completeness the parameters:
 
 ||'''Name''' ||'''Datatype''' ||'''Description''' ||