Changes between Version 75 and Version 76 of SopConvertLifeLinesGenoData

Timestamp:

2013-04-03T09:55:21+02:00 (13 years ago)

Author:

Roan Kanninga

Comment:

--

SopConvertLifeLinesGenoData

@@ -138 +138 @@
 If you see values here; please check with research office (Salome Scholtens)
 === Step 5: release ===
+
+clean up
 {{{
 cd ../lifelines_OV039/
@@ -147 +149 @@
 rm *.missing
 
-#copy the quality scores
-cp /target/gpfs2/lifelines_rp/releases/LL3/BeagleImputeDosage/BeagleImputedQualityScores.txt OV039_imputation_batch_qualities.txt
-
-#give user permission to see the data
-chown lifelines_OV039:lifelines *
+#give read access to the 'lifelines' group
+chgroup -R lifelines *
+
+}}}
+
+Change to user for the study, e.g. lifelines_OV039
+{{{
+#copy data to home directory (assume you are in home now)
+cp /target/gpfs2/lifelines_rp/releases/LL3/lifelines_OV039 .
+
+#reduce read to user only
+chmod -R go-r *
 }}}