Changes between Version 8 and Version 9 of SopConvertLifeLinesGenoData

Timestamp:

2012-04-04T06:56:59+02:00 (13 years ago)

Author:

Morris Swertz

Comment:

--

SopConvertLifeLinesGenoData

@@ -48 +48 @@
 
 === Step 2: run convertor to create study<n>.tped ===
+Estimated runtime: 200 minutes.
 
 cd to directory:
@@ -64 +65 @@
 /target/gpfs2/lifelines_rp/tools/jdk1.6.0_22/bin/java -jar TriToPlinkLifeLines.jar P BeagleImputedTriTyper/ study<n> subset_study<n>.txt
 }}}
-
-Estimated runtime: 
 
 Note:
@@ -95 +94 @@
 
 >NB: If this takes long we should make this cluster jobs!
-
 === Step 4: convert into dosage format (MISSING!) ===