Changes between Version 3 and Version 4 of generateArtificialGwas

Timestamp:

2012-09-06T14:07:43+02:00 (12 years ago)

Author:

Patrick

Comment:

--

generateArtificialGwas

@@ -10 +10 @@
 
 = Procedure =
-For this analysis we used the hapmap data:
+For this analysis we used chr 22 of the hapmap data:
 
  * Genotype data: https://mathgen.stats.ox.ac.uk/wtccc-software/rel24_poly/haplotype+legend_files_CEU_r24.tgz
@@ -25 +25 @@
 == Convert to ped/map ==
 {{{
-gtool -G --g test.gen --s test.samples --ped test.ped --map test.map --phenotype pheno
+gtool -G --g test.gen --s test.samples --ped test.ped --map test.map --phenotype pheno --chr 22
+
 }}}
+== Test with GWAS ==