TracNav(xQTL)?

Browse or search available data

Go to 'Browse data'.

Overview

• The first tab named Overview will present you with a summary view of all entries in this investigation.
• You can change investigations with the arrowed buttons at the top.
• Clicking on a type of data will take you there. This is a shorthand: you can always browse to all datatypes using the tabs View data, View annotations, and View files.
• Similarly, the Add button is a shorthand to be taken to the tabs of this data category (data, annotations or file) where you can start adding data with the Add new record button.
• The default view will display 4 entries for each type: use Show all to expand.

there also a short hand

View data

• This tab allows you to add, view and remove data matrices. These are rectangular pieces of (raw) experimental data accompanied by row- and column names.
• Matrices themselves are annoted with the 'Data' entries, while their row- and column entries are annotated as separate (strong) datatypes found in the View annotations tab.
• There are a number of plugins that will help you deal with matrices:
  • Manager = Uploads data and views the numerical/textual data.
  • Heatmap = View numerical values as a customizable heatmap.
  • Rplot = Create graphical plots using R.
  • Inspector = Check whether annotations are missing.
  • Delete storage = Delete source data linked to this 'Data' entry.
  • ManagerDev? = Advanced manager - currently under development!

View annotations

view xgap datatypes that annotate matrices

View files

view files stored in the database with a default viewer