Changes between Version 4 and Version 5 of xQTLBiologistImport

Timestamp:

2011-09-08T09:26:50+02:00 (13 years ago)

Author:

jvelde

Comment:

--

xQTLBiologistImport

@@ -17 +17 @@
 * The QTL analysis needs to know which type of cross was used. It looks at the annotation of the '''first individual''' of the genotypes to get cross type from the ''ontologyReference'' field. Set this to e.g. ''xgap_rqtl_straintype_riself'' to indicate the cross is a recombinant inbred line by selfing. The coding is taken from Rqtl.
 
+=== Help: my data must be transposed ===
+
+The importers for genotype and phenotype files expect you to put individuals on the first line, making them the column headers. If your rows and columns are 'flipped' and would need transposing, don't worry. Just upload the files. You should just re-annotate your rows and columns by going to ''Browse data'' in the main menu, then select ''View data'' and find your recent uploaded data matrix. Click ''Show additional fields'' to show the full annotation. Use the dropdown menus to swap the values of 'FeatureType' (columns) and 'TargetType' (rows). Press ''save the changes''.
+
 === Other data ===