Changes between Version 5 and Version 6 of xQTLIntroduction
- Timestamp:
- 2012-01-30T14:15:14+01:00 (13 years ago)
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xQTLIntroduction
v5 v6 3 3 = xQTL Introduction = 4 4 5 xQTL workbench is a scalable web system for the 6 integrated mapping of thousands of quantitative trait loci (QTLs) at 7 multiple levels: 5 xQTL workbench is a scalable web system for the integrated mapping of thousands of quantitative trait loci (QTLs) at multiple levels: 8 6 9 * gene expression (eQTL),10 * protein abundance (pQTL),11 * metabolite abundance (mQTL) and12 * phenotype (phQTL) levels.7 * Gene expression (eQTL) 8 * Protein abundance (pQTL) 9 * Metabolite abundance (mQTL) 10 * Phenotype (phQTL) levels 13 11 14 12 Main features: 15 * Popular QTL mapping methods are accessible via the web user interface ,16 * large calculations scale easily on to multi-core computers, clusters, and Cloud, and17 * all data involved can be uploaded and queried online:18 * markers,19 * genotypes,20 * microarrays,21 * NGS ,22 * LC-MS ,23 * GC-MS ,24 * NMR , etc.13 * Popular QTL mapping methods are accessible via the web user interface 14 * Large calculations scale easily on to multi-core computers, clusters, and cloud 15 * All data involved can be uploaded and queried online: 16 * Markers 17 * Genotypes 18 * Microarrays 19 * NGS 20 * LC-MS 21 * GC-MS 22 * NMR 25 23 * When new data types come available, xQTL workbench can be rapidly customized using the Molgenis toolkit. See MolgenisGuide. 26 24 27 workbench can be rapidly customized using the Molgenis toolkit. See MolgenisGuide.25 xQTL workbench can be rapidly customized using the Molgenis toolkit. See MolgenisGuide.