Changes between Version 3 and Version 4 of xQTLTutorialBiologistUploadingData


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Timestamp:
2012-02-20T15:41:54+01:00 (13 years ago)
Author:
Morris Swertz
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  • xQTLTutorialBiologistUploadingData

    v3 v4  
    55We will start by uploading a dataset with geno- and phenotype information. There are many ways to enter data into xQTL, such as uploading CSV or Excel files, using the R API, or manual per-record entry. To make uploading a typical QTL-study dataset as easy as possible, we developed a specialized 'R/qtl importer'. Note: for more general information about uploading data, see: [wiki:xQTLBiologistImport]
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     7== Step 1: Download example data ==
    78Let's first download an example dataset that is accepted by this importer. Download the respective genotype, phenotype and map files from:
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    1920You can ofcourse also use your own data if the format is good enough.
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     22== Step 2: Upload data into system ==
    2123Now let's import them. Go to ''Upload data'', ''R/qtl'' in the main menu.
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    4042|| [wiki:xQTLTutorialStart Previous: Overview of the tutorial] || [wiki:xQTLTutorialBiologistInspectingData Continue to: Inspecting the uploaded data] ||
     43|| [wiki:xQTLTutorialStart Previous: Overview of the tutorial] || [wiki:xQTLTutorialBiologistInspectingData Continue to: Inspecting the uploaded data] ||