Changes between Version 1 and Version 2 of xQTLBiologistBrowse


Ignore:
Timestamp:
2011-09-06T13:29:59+02:00 (13 years ago)
Author:
jvelde
Comment:

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  • xQTLBiologistBrowse

    v1 v2  
    55Go to 'Browse data'.
    66
    7 == Overview ==
     7=== Overview ===
    88
    9 The first tab 'Overview' will present you with a summary of entries in this investigation. You can change investigations with the arrowed buttons at the top.
    10 
    11 click on a type of data will take you there. This is a shorthand: you can always browse to all datatypes using the tabs 'View data', 'View annotations', and 'View files'.
     9* The first tab named ''Overview'' will present you with a summary view of all entries in this investigation.
     10* You can change investigations with the arrowed buttons at the top.
     11* Clicking on a type of data will take you there. This is a shorthand: you can always browse to all datatypes using the tabs ''View data'', ''View annotations'', and ''View files''.
     12* Similarly, the ''Add'' button is a shorthand to be taken to the tabs of this data category (data, annotations or file) where you can start adding data with the ''Add new record'' button.
     13* The default view will display 4 entries for each type: use ''Show all'' to expand.
    1214
    1315there also a short hand
    1416
    15 == View data ==
     17=== View data ===
    1618
    17 = matrix =
     19* This tab allows you to add, view and remove data matrices. These are rectangular pieces of (raw) experimental data accompanied by row- and column names.
     20* Matrices themselves are annoted with the 'Data' entries, while their row- and column entries are annotated as separate (strong) datatypes found in the ''View annotations'' tab.
     21* There are a number of plugins that will help you deal with matrices:
     22 * Manager = Uploads data and views the numerical/textual data.
     23 * Heatmap = View numerical values as a customizable heatmap.
     24 * Rplot = Create graphical plots using R.
     25 * Inspector = Check whether annotations are missing.
     26 * Delete storage = Delete source data linked to this 'Data' entry.
     27 * ManagerDev = Advanced manager - currently under development!
    1828
    19 matrix viewer
    20 
    21 = heatmap =
    22 
    23 heatmap viewer
    24 
    25 = Rplot =
    26 
    27 plotjes maken
    28 
    29 = Inspector =
    30 
    31 missing annotations and such
    32 
    33 = Delete storage =
    34 
    35 remove the data for this matrix
    36 
    37 = Matrix v2 =
    38 
    39 advanced viewer - UNDER DEVELOPMENT
    40 
    41 == View annotations ==
     29=== View annotations ===
    4230
    4331view xgap datatypes that annotate matrices
    4432
    45 == View files ==
     33=== View files ===
    4634
    4735view files stored in the database with a default viewer