Documentation for the UMCG/LifeLines High Performance Computing (HPC) environments

These pages describe the UMCG/LifeLines HPC version 2.x environment maintained by the ​GCC and ​RUG CIT. A summary of the differences between this one and other HPC environments is available in the ​Overview of High Performance Computing (HPC) environments @ UMCG/RUG

For Users

• Overview - Description of the different HPC environments
• Getting access - How to request an account.
• Available resources - What is available and where.
• Login - How to start a session.
• Storage SOP - What is stored where.
• Analyses SOP - How to manage your jobs on the cluster.
• Support - FAQs, mailinglists, courses and contact info to get in touch with an admin.
• Scheduled Maintenance - Policy and dates for scheduled maintenance.

For public beta Testers

• There is currently no test cluster: all clusters run in production mode.

For Admins

• SOP Accounts - Managing users and groups for the HPC infrastructure.
• Deploy Apps & Data - SOP for central deployment of software and reference data sets.
• Shared Storage Config - How are logical file systems related to physical ones.
• Compute Config - SLURM schedulers, partitions and nodes.