wiki:HPC

Version 12 (modified by Pieter Neerincx, 9 years ago) (diff)

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Documentation for the UMCG/LifeLines High Performance Computing (HPC) environments

There are two flavors of HPC environments:

  • Version 1.x (old), which is deprecated and will be completely phased out before the end of 2015
  • Version 2.x (new)

These pages describe the UMCG/LifeLines HPC version 2.x environment maintained by the GCC and RUG CIT. (The previous 1.x setup is documented here GCC HPC cluster + SFTP server)

A summary of the differences between the 1.x and 2.x environments is available in the Overview of High Performance Computing (HPC) environments @ UMCG/RUG

Table of Contents

  1. For Users
  2. For Admins

For Users

For Admins

  • SOP New User - Creating a new user account for the HPC infrastructure
  • Deploy Tools - SOP Deploy Software and Reference Data.
  • Shared Storage Config? - How are logical file systems related to physical ones.
  • Compute Config? - SLURM schedulers, partitions and nodes.