Documentation for the UMCG/LifeLines High Performance Computing (HPC) environments

There are two flavors of HPC environments:

• Version 1.x (old), which is deprecated and will be completely phased out before the end of 2015
• Version 2.x (new)

These pages describe the UMCG/LifeLines HPC version 2.x environment maintained by the ​GCC and ​RUG CIT. (The previous 1.x setup is documented here GCC HPC cluster + SFTP server)

A summary of the differences between the 1.x and 2.x environments is available in the ​Overview of High Performance Computing (HPC) environments @ UMCG/RUG

For Users

• ​Getting access - How to request an account
• ​Available resources - What is available and where
• ​Login - How to start a session
• ​Storage SOP - What is stored where
• ​Analyses SOP - How to manage your jobs on the cluster
• ​Support - FAQs, mailinglists, courses and contact info to get in touch with an admin

For Admins

• SOP New User - Creating a new user account for the HPC infrastructure
• SOP Deploy Software and Reference Data.
• Shared Storage Config
• Cluster Config